References

Genomics, transcriptomics and proteomics
  1. : “Mind the Gap”: Hi-C Technology Boosts Contiguity of the Globe Artichoke Genome in Low-Recombination Regions. G3: Genes, Genomes, Genetics , 10: 3557-3564. |
  2. : Genome reconstruction in Cynara cardunculus taxa gains access to chromosome-scale DNA variation. Scientific Reports , 7: 5617. |
  3. : The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny. Scientific Reports , 6: 19427. |
  4. : A Genome-Wide Survey of the Microsatellite Content of the Globe Artichoke Genome and the Development of a Web-Based Database. PLoS ONE , 11(9): e0162841. |
  5. : Large-scale transcriptome characterization and mass discovery of SNPs in globe artichoke and its related taxa. Plant Biotechnology Journal , 10(8): 956-69. |
  6. : RAD tag sequencing as a source of SNP markers in Cynara cardunculus L. BMC Genomics , 13: 3. |
  7. : 2-D DIGE analysis of UV-C radiation-responsive proteins in globe artichoke leaves. Proteomics , 12: 448–460. |
  8. : Proteomic analysis of PEG-fractionated UV-C stress-response proteins in globe artichoke. Plant Molecular Biology Reporter , 30: 111-122.
  9. : Proteomics in globe artichoke: protein extraction and sample complexity reduction by PEG fractionation. Electrophoresis , 30: 1594–1602. |
  10. : Retrotransposon based S-SAP as a platform for the analysis of genetic variation and linkage in globe artichoke. Genome , 49 (9): 1149-1156. |
Microsatellite development
  1. : Ontology and diversity of transcript-associated microsatellites mined from a globe artichoke EST database. BMC Genomics , 10: 454. |
  2. : Genetic mapping and annotation of genomic microsatellites isolated from globe artichoke. Theoretical and Applied Genetics , 118: 1573-1587. |
  3. : M-AFLP-based protocol for microsatellite loci isolation in Cynara cardunculus L. (Asteraceae). Molecular Ecology Notes , 5(2): 272-274.
  4. : Development and characterization of microsatellite markers in Cynara cardunculus L. Genome , 48(2): 217-225. |
  5. : Isolation of microsatellite loci in artichoke (Cynara cardunculus L. var. scolymus). Molecular Ecology Notes , 3(1): 37-39.
Functional genomics
  1. : Analysis of DNA methylation patterns associated with in vitro propagated globe artichoke plants using an epiRADseq-based approach. Genes , 10(4): 263. |
  2. : The genome-wide identification and transcriptional levels of DNA methyltransferases and demethylases in globe artichoke. PLoS One , 12: 1. e0181669. |
  3. : Genome-wide identification of BAHD acyltransferases and in vivo characterization of HQT-like enzymes involved in caffeoylquinic acid synthesis in globe artichoke. Frontiers in Plant Science , 7: 1424. |
  4. : Accumulation of cynaropicrin in globe artichoke and localization of enzymes involved in its biosynthesis. Plant Science , 239: 128–136. |
  5. : Cytochrome P450s from Cynara cardunculus L. CYP71AV9 and CYP71BL5, catalyze distinct hydroxylations in the sesquiterpenelactone biosynthetic pathway. Plant Science , 223: 59–68. |
  6. : In vitro callus-induction in globe artichoke (Cynara cardunculus var. scolymus) as a system for the production of caffeoylquinic acids. Journal of Horticultural Science and Biotechnology , 88: 537-542.
  7. : Genetic mapping characterization of the globe artichoke (+)-germacrene A synthase gene, encoding the first dedicated enzyme for biosynthesis of the bitter sesquiterpene lactone cynaropicrin. Plant Science , 190: 1-8. |
  8. : Identification and mapping of genes related to caffeoylquinic acid synthesis in Cynara cardunculus L. Plant Science , 179(4): 338-347.
  9. : Isolation and mapping of a C3’H gene (CYP98A49) from globe artichoke, and its expression upon UV-C stress. Plant Cell Reports , 28 (6): 963-974. |
  10. : The isolation and mapping of a novel hydroxycinnamoyltransferase in the globe artichoke chlorogenic acid pathway. BMC Plant Biology , 9: 30. |
  11. : Stress-induced biosynthesis of dicaffeoylquinic acids in globe artichoke. J Agric Food Chem , 56(18): 8641-8649. |
  12. : Simultaneous quantification of caffeoyl esters and flavonoids in wild and cultivated cardoon leaves. <Food Chemistry , 105: 1695-1701.
  13. : Isolation and functional characterization of a cDNA coding a hydroxycinnamoyltransferase involved in phenylpropanoid biosynthesis in Cynara cardunculus L. BMC Plant Biology , 7: 14. |
Linkage maps construction and QTL analysis
  1. : Mapping the genomic regions encoding biomass-related traits in Cynara cardunculus L. 1. Molecular Breeding , 38(5): 64.
  2. : The inheritance of bract pigmentation and fleshy thorns on the globe artichoke capitulum. Euphytica , 206: 523-531.
  3. : Mapping yield-associated trait QTL in globe artichoke. Molecular Breeding , 34: 615–630.
  4. : Mining SNPs and linkage analysis in Cynara cardunculus. In: Genomics of Plant Genetic Resources, Volume 1: managing, sequencing and mining genetic resources. Tuberosa R, Graner A, Frison E (eds.) 710 p. Springer Science+Business Media Dordrecht , Chapter 22, page 533-557.
  5. : New genetic maps for globe artichoke and wild cardoon and their alignment with an SSR-based consensus map. Molecular Breeding , 32: 177-187.
  6. : Genetic mapping and identification of QTL for earliness in the globe artichoke / cultivated cardoon complex. BMC Research Notes , 5: 252. |
  7. : Construction of a reference molecular linkage map of globe artichoke (Cynara cardunculus var. scolymus). Theoretical and Applied Genetics , 120: 59-70. |
  8. : A first linkage map of globe artichoke (Cynara cardunculus var. scolymus L.) based on AFLP, S-SAP, M-AFLP and microsatellite markers. Theoretical and Applied Genetics , 112(8): 1532-1542. |
Germplasm characterization, molecular fingerprinting and clonal selection
  1. : An integrated model to accelerate the development of seed-propagated varieties of globe artichoke. Crop Breeding and Applied Biotechnology , 18: 72-80.
  2. : Leaf polyphenol profile and SSR-based fingerprinting of new segregant Cynara cardunculus genotypes. Frontiers in Plant Science , 5: 800. |
  3. : Clonal selection in a globe artichoke landrace: characterization of superior germplasm to improve cultivation in Mediterranean environments. The Journal of Agricultural Science , 153: 102-113.
  4. : Genotypic and bio-agronomical characterization of an early Sicilian landrace of globe artichoke. Euphytica , 186(2): 357-366.
  5. : Morphology and SSR fingerprinting of newly developed Cynara cardunculus genotypes exploitable as ornamentals. Euphytica , 184: 311-321.
  6. : Production and fingerprinting of virus-free clones in a reflowering globe artichoke. Plant Cell, Tissue and Organ Culture , 100: 329-337. |
  7. : Genetic diversity of globe artichoke landraces from Sicilian small-holdings: implications for evolution and domestication of the species. Conservation Genetics , 10: 431-440.
  8. : Globe Artichoke and Cardoon. In Vegetables I. Volume 1. Edited by Springer, New York: Springer; , page 49-74.
  9. : Genetic structure of island populations of wild cardoon [Cynara cardunculus L. var. sylvestris (Lamk) Fiori] detected by AFLPs and SSRs. Plant Science , 169(1): 199-210.
  10. : Genetic diversity assessment in cultivated cardoon by AFLP (amplified fragment length polymorphism) and microsatellite markers. Plant Breeding , 124(3): 299-304.
  11. : Population structure and genetic variation in autochthonous globe artichoke germplasm from Sicily Island. Plant Science , 168(6): 1591-1598.
  12. : Amplified fragment length polymorphism for genetic diversity assessment in globe artichoke. Theoretical and Applied Genetics , 108(8): 1534-1544. |
  13. : Molecular fingerprinting and evaluation of genetic distances among selected clones of globe artichoke (Cynara cardunculus L. var. scolymus L.) ‘Spinoso sardo’. Journal of Horticultural Science and Biotechnology , 79(6): 863-870.
  14. : RAPD variation within and among populations of globe artichoke cultivar ‘Spinoso sardo’. Plant breeding , 120(3): 243-246.

Globe Artichoke Microsatellite DataBase - DISAFA